BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A12LP1|AL426631
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1785 1561 0.0
>3x_Contig1785
Length = 37935
Score = 1561 bits (785), Expect = 0.0
Identities = 789/793 (99%)
Strand = Plus / Minus
Query: 1 aggcactagatatcatattacccaattggtaagcaacaccagtgatcaaagctctgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15857 aggcactagatatcatattacccaattggtaagcaacaccagtgatcaaagctctgaact 15798
Query: 61 ccgttggggctaattccgtcaaatgaattgggacaataccccaagcaccttggacgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15797 ccgttggggctaattccgtcaaatgaattgggacaataccccaagcaccttggacgaaga 15738
Query: 121 attgtaagaagaagactgaagcattaattccagatttattagcaacaaaaccccatgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15737 attgtaagaagaagactgaagcattaattccagatttattagcaacaaaaccccatgggt 15678
Query: 181 ataacatagcaccaccgccaatacaacatacaatgatagagaatctacgaccaaagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15677 ataacatagcaccaccgccaatacaacatacaatgatagagaatctacgaccaaagaaag 15618
Query: 241 aggaggcatgggcaacaatgataccaccagcgatggcaccaaggtttgcaacagagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15617 aggaggcatgggcaacaatgataccaccagcgatggcaccaaggtttgcaacagagtttg 15558
Query: 301 twacagttgatgcatcagcggagaattggtattgagaagtcaacattgttgggaaaagat 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557 taacagttgatgcatcagcggagaattggtattgagaagtcaacattgttgggaaaagat 15498
Query: 361 cttgagaaccatgggaggagaagttgaaacctgccattaaaagaaccaagtaaatcatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15497 cttgagaaccatgggaggagaagttgaaacctgccattaaaagaaccaagtaaatcatac 15438
Query: 421 ttagccaatattgagaacaggcaagcttagcattcttccagaattgagacttcccatcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15437 ttagccaatattgagaacaggcaagcttagcattcttccagaattgagacttcccatcgt 15378
Query: 481 tttctaatttttccaaacggactctttcgacatagtgttgggattcaggtaacatcaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15377 tttctaatttttccaaacggactctttcgacatagtgttgggattcaggtaacatcaacc 15318
Query: 541 tccaagcaatgaaaagcactgggggcccggcactgaaccagaatatagctctccaaccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15317 tccaagcaatgaaaagcactgggggcccggcactgaaccagaatatagctctccaaccat 15258
Query: 601 gtggagaattatcaacaatagctctttggaacacgacacctaataaatwaccgaaagcat 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15257 gtggagaattatcaacaatagctctttggaacacgacacctaataaataaccgaaagcat 15198
Query: 661 aaccttcttggaatataccagaaaggatggacttagccttgtttggagcattttccaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15197 aaccttcttggaatataccagaaaggatggacttagccttgtttggagcattttccaagg 15138
Query: 721 cagtggmagaagcaacaccaaatacagatcccataatgatamcaaagatagctctacacc 780
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 15137 cagtggcagaagcaacaccaaatacagatcccataatgataccaaagatagctctacacc 15078
Query: 781 ccaagaaagcaga 793
|||||||||||||
Sbjct: 15077 ccaagaaagcaga 15065
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5663
Number of Sequences: 1807
Number of extensions: 5663
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)